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AI Summary: Demonstrates how biological world models can act as simulated environments to train and verify the reasoning paths of autonomous biological AI agents.

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rbio1: Training Scientific Reasoning LLMs with Biological World Models as Soft Verifiers

Elena K. Sharma·
David Chen·
Marcus Thorne·
Yujin Han

ABSTRACT

A critical bottleneck in training autonomous agents for biology is the scarcity of high-throughput experimental data for reward modeling. We introduce rbio1, a framework that trains scientific reasoning LLMs using 'world models' of biology as soft verifiers instead of ground-truth wet-lab data. By formulating virtual cell model systems that simulate disease-to-healthy state transitions, our agent iteratively refines its hypotheses against the simulated biological environment. This approach allows language-driven agents to conduct large-scale, multi-step inference and deductive reasoning on cellular perturbation tasks without the prohibitive cost of physical experiments.

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